Publications and preprints:
M. Chaves,
R. Albert and E.D. Sontag.
Methods of robustness analysis for Boolean models of gene
control networks.
Submitted.
M. Chaves.
Input-to-state stability of rate-controlled biochemical networks.
SIAM J. Control and Optimization, in press.
M. Chaves,
R. Albert and E.D. Sontag.
Robustness and fragility of Boolean models for genetic
regulatory networks.
J. Theoretical Biology, 235(3)(2005), pp. 431-449.
(A version is available at http://arXiv.org/
as q-bio.MN/0501037.)
E.D. Sontag and M. Chaves.
Computation of amplification for systems arising from cellular
signaling pathways.
Accepted for the 16th IFAC World Congress, Prague, Czech
Republic, July 2005.
M. Chaves, E.D. Sontag
and R.J. Dinerstein.
Gains and optimal design in signaling pathways.
Proc. Conf. Decision and Control (CDC'04), Paradise Island, The Bahamas, Dec. 2004.
M. Chaves, E.D. Sontag
and R.J. Dinerstein.
Optimal length and signal amplification in weakly activated signal
transduction cascades.
J. Physical Chemistry B 108(2004), pp. 15311-15320.
(A previous version is available at http://arXiv.org/
as math.OC/0311357.)
M. Chaves, E.D. Sontag
and R.J. Dinerstein.
Steady-states of receptor--ligand
dynamics: a theoretical framework.
J. Theoretical Biology 227(2004), pp. 413-428.
M. Chaves.
Observer design for a class of
nonlinear systems, with applications to biochemical networks.
PhD. thesis, Rutgers University, NJ, May 2003.
S. Glavaski, M. Chaves, R. Day, P. Nag, A. Wiliams and W. Zhang.
Vehicle networks: achieving
regular formation.
Proc. American Control Conf. (ACC'03), Denver, Colorado, June 2003.
M. Chaves.
A parameter-robust observer
as an application of ISS techniques.
Proc. Int. Symp. Mathematical Theory of Networks and Systems
(MTNS'02), South Bend, Indiana, Aug. 2002.
M. Chaves and E.D. Sontag.
State-estimators for chemical
reaction networks of Feinberg-Horn-Jackson zero deficiency type.
European J. Control 8(2002), pp. 343-359.
M. Chaves and E.D. Sontag.
Observers for chemical reaction networks.
Proc. European Control Conf. (ECC'01), Porto, Portugal, Sep. 2001.
M. Chaves and E.D. Sontag.
An alternative observer
for zero deficiency chemical networks.
Proc. IFAC Nonlinear Control Systems Symp. (NOLCOS'01),
St. Petersburg, Russia, July 2001.
F. Albertini and M. Chaves.
Stabilizability of continuous time systems with saturation nonlinearities.
Report of a Summer research project at Rutgers University, 1998/99.
Recent Meetings and Presentations:
"Zero-deficiency chemical networks and the analysis of
receptor/ligand interactions" .
Invited colloquium at the Dep. Mathematics, George Washington
University, Washington DC (Apr. 2005).
"System gain and optimal length for signal transduction cascades".
Invited presentation at the
Northeast Nonlinear and Hybrid Control Workshop ,
Rensselaer Polytechnic Institute, Troy, NY (Apr. 2005) .
"Some theoretical aspects of cell signaling: receptor-ligand
interactions and signal amplification cascades".
Invited seminar at the
Hamilton Institute ,
Maynooth, Ireland (Feb. 2005).
"Gains and optimal design in signaling pathways".
Presentation at the Conference on Decision and Control (CDC'04),
Paradise Island, The Bahamas (Dec. 2004).
"Modeling calcium signaling and its connection to receptor-ligand interactions".
Invited seminar at the Systems Biology Group,
Institut Pasteur,
Paris, France (Sep. 2004).
"Some theoretical aspects of cell signaling: receptor-ligand
interactions and signal amplification cascades".
Invited seminar at the
Institut fur Systemtheorie Technischer Prozesse,
Universitat Stuttgart, Germany (Aug. 2004).
"A model of receptor-ligand interactions, and cell signaling".
Invited presentation at the workshop:
Dynamics, control and computation in biochemical networks.
Banff International Research Station, Canada (Aug. 2004).
"Un mod\`ele pour les interactions r\'ecepteur-ligand".
Presentation at the Forum des Jeunes Math\'ematiciennes:
Math\'ematiques, Informatique et Sciences du Vivant.
Institut Henri Poincar\'e, Paris, France (Jan. 2004).
"A parameter-robust observer as an application of ISS techniques".
Presentation at the Symposium on Mathematical Theory of Networks and Systems (MTNS'02),
South Bend, Indiana (Aug. 2002).
"Observers for chemical reaction networks".
Presentation at the European Control Conf. (ECC'01), Porto, Portugal (Sep. 2001).
"An alternative observer for zero deficiency chemical networks".
Presentation at the IFAC Nonlinear Control Systems Symposium (NOLCOS'01),
St. Petersburg, Russia (July 2001).
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